PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0499s0150.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 233aa    MW: 25758.5 Da    PI: 5.8399
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0499s0150.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-205099255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                            +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a++k++g
  SapurV1A.0499s0150.1.p 50 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAVAYDKAALKFKG 99
                            7********.**********94....45************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.9E-3349108IPR001471AP2/ERF domain
PROSITE profilePS5103224.85650107IPR001471AP2/ERF domain
CDDcd000181.06E-3450108No hitNo description
SuperFamilySSF541718.5E-2350108IPR016177DNA-binding domain
SMARTSM003803.6E-3850113IPR001471AP2/ERF domain
PfamPF008479.8E-135099IPR001471AP2/ERF domain
PRINTSPR003678.7E-125162IPR001471AP2/ERF domain
PRINTSPR003678.7E-127389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MSAMVSALTQ VMGNPTSVQS TQSAPEQSVV KDEPELSRPV QDQENTRKRH YRGVRQRPWG  60
KWAAEIRDPK KAARVWLGTF DTAEDAAVAY DKAALKFKGT KAKLNFPERV QGRTEFGYFM  120
GSGASSNVLT EQSPRPVAPP PPPPPPPSSF APDTYPDLLQ YAQILSSNDA NFPYYTSNLF  180
NQQPFAPDFS SSFLSPQQLQ QQQDLMRFSS GFDTSFSSDQ QEHGKDSSNP SE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-2849110466ATERF1
3gcc_A8e-2849110466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020891.11e-120PREDICTED: ethylene-responsive transcription factor ERF113-like
SwissprotQ9LYU31e-50EF113_ARATH; Ethylene-responsive transcription factor ERF113
TrEMBLB9GZ211e-113B9GZ21_POPTR; AP2 domain-containing transcription factor family protein
STRINGPOPTR_0001s12990.11e-104(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.12e-42related to AP2 6l